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what is CFTR?
A channel that moves salt (chloride) in and out of cells. When it fails, mucus turns thick and clogs the lungs and gut, causing cystic fibrosis.
how the AI did on CFTR
AlphaMissense matched the confirmed verdict on 176 of 190 mutations (93%). It missed 11 and raised 3 false alarms.
accuracy
vs doctors
0.92
vs lab
n/a
Note: AlphaMissense was trained on ClinVar, so “vs doctors” partly grades it on its own answer key and reads high. The independent check is “vs lab.” why this matters →
▸ the breakdown · true / false positives
AI vs doctors
160TP
11FN
3FP
16TN
the mutation
M1V
Met → Val at position 1
✗ AI was wrongFN
AlphaMissense called it harmless, but it is disease-causing. A miss.
Every CFTR variant: the raw evidence
Each row: what the AI guessed, and what each real source said. Doctors (ClinVar) is the clinical record the AI was tuned on.
| Mutation | The AI’s guess | Clinical | Expert panel | Did the AI get it right? |
|---|---|---|---|---|
| M1I | harmful0.68 | harmful★★↗ | Not measured | ✓ right |
| M1R | harmful0.66 | harmful★★↗ | Not measured | ✓ right |
| M1T | harmful0.80 | harmful★★↗ | Not measured | ✓ right |
| M1V | harmless0.18 | harmful★★★↗ | harmful↗ | ✗ missed it |
| P5L | harmful0.75 | harmful★★↗ | Not measured | ✓ right |
| S13F | harmful0.76 | harmful★★★↗ | harmful↗ | ✓ right |
| L15P | harmful0.76 | harmful★★★↗ | harmful↗ | ✓ right |
| G27R | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| R31C | harmless0.11 | Not measured | harmless↗ | ✓ right |
| A46D | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| S50P | harmful0.96 | harmful★★↗ | Not measured | ✓ right |
| E56K | harmful0.88 | harmful★★★↗ | harmful↗ | ✓ right |
| W57G | harmful0.96 | harmful★★★↗ | harmful↗ | ✓ right |
| W57R | harmful1.00 | harmful★★↗ | Not measured | ✓ right |
| E60K | harmful0.96 | harmful★★★↗ | harmful↗ | ✓ right |
| P67L | harmful0.65 | harmful★★★↗ | harmful↗ | ✓ right |
| P67S | harmful0.62 | harmful★★↗ | Not measured | ✓ right |
| R75Q | harmless0.20 | Not measured | harmless↗ | ✓ right |
| G85E | harmful0.99 | harmful★★★★↗ | harmful↗ | ✓ right |
| G85V | harmful0.94 | harmful★★↗ | Not measured | ✓ right |
| G91R | harmful0.95 | harmful★★★↗ | harmful↗ | ✓ right |
| E92K | harmful0.94 | harmful★★★↗ | harmful↗ | ✓ right |
| Q98R | harmful0.94 | harmful★★★↗ | harmful↗ | ✓ right |
| P99L | harmful0.97 | harmful★★★↗ | harmful↗ | ✓ right |
| L102P | harmful0.98 | harmful★★↗ | Not measured | ✓ right |
| L102R | harmful0.95 | harmful★★★↗ | harmful↗ | ✓ right |
| I105N | harmful0.96 | harmful★★↗ | Not measured | ✓ right |
| Y109C | harmful0.73 | harmful★★↗ | Not measured | ✓ right |
| D110E | harmful0.72 | harmful★★↗ | Not measured | ✓ right |
| D110H | harmful0.64 | harmful★★★↗ | harmful↗ | ✓ right |
| D110N | unsure0.36 | harmful★★↗ | Not measured | AI unsure |
| P111A | harmless0.12 | harmful★★↗ | Not measured | ✗ missed it |
| E116K | harmful0.85 | harmful★★★↗ | harmful↗ | ✓ right |
| R117C | harmful0.62 | harmful★★★↗ | harmful↗ | ✓ right |
| R117G | harmful0.69 | harmful★★↗ | Not measured | ✓ right |
| R117H | harmless0.30 | harmful★★★★↗ | Not measured | ✗ missed it |
| R117L | harmful0.68 | harmful★★↗ | Not measured | ✓ right |
| R117P | harmful0.97 | harmful★★★↗ | harmful↗ | ✓ right |
| G126D | harmful0.98 | harmful★★★↗ | Not measured | ✓ right |
| H139L | unsure0.54 | harmful★★↗ | Not measured | AI unsure |
| H139R | harmful0.90 | harmful★★★↗ | harmful↗ | ✓ right |
| L145H | harmful0.93 | harmful★★↗ | Not measured | ✓ right |
| I148T | harmless0.12 | Not measured | harmless↗ | ✓ right |
| G149R | harmful0.99 | harmful★★↗ | Not measured | ✓ right |
| M152V | harmless0.11 | harmful★★↗ | Not measured | ✗ missed it |
| Y161D | harmful0.99 | harmful★★★↗ | harmful↗ | ✓ right |
| K162E | harmful0.91 | harmful★★↗ | Not measured | ✓ right |
| L165S | harmful0.97 | harmful★★★↗ | harmful↗ | ✓ right |
| R170H | harmless0.16 | Not measured | harmless↗ | ✓ right |
| I175V | harmless0.19 | harmful★★↗ | Not measured | ✗ missed it |
| G178R | harmful0.76 | harmful★★★↗ | harmful↗ | ✓ right |
| F191V | harmful0.59 | harmful★★★↗ | harmful↗ | ✓ right |
| D192G | harmful0.89 | harmful★★★↗ | harmful↗ | ✓ right |
| E193K | harmful0.68 | harmful★★★↗ | harmful↗ | ✓ right |
| G194R | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| H199R | harmful0.97 | harmful★★↗ | Not measured | ✓ right |
| H199Y | harmful0.79 | harmful★★★↗ | harmful↗ | ✓ right |
| P205S | harmful0.78 | harmful★★★↗ | harmful↗ | ✓ right |
| P205T | harmful0.65 | harmful★★↗ | Not measured | ✓ right |
| L206W | harmful0.62 | harmful★★★↗ | harmful↗ | ✓ right |
| L227R | harmful0.97 | harmful★★★↗ | harmful↗ | ✓ right |
| V232D | harmful0.89 | harmful★★★↗ | harmful↗ | ✓ right |
| Q237E | unsure0.46 | harmful★★↗ | Not measured | AI unsure |
| F311L | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| G314R | harmful0.99 | harmful★★↗ | Not measured | ✓ right |
| L320V | harmless0.16 | Not measured | harmless↗ | ✓ right |
| R334L | harmful0.88 | harmful★★★↗ | harmful↗ | ✓ right |
| R334W | harmful0.66 | harmful★★★★↗ | harmful↗ | ✓ right |
| I336K | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| T338I | harmful0.83 | harmful★★★↗ | harmful↗ | ✓ right |
| S341P | harmful0.95 | harmful★★★↗ | harmful↗ | ✓ right |
| L346P | harmful0.99 | harmful★★★↗ | harmful↗ | ✓ right |
| R347H | harmful0.85 | harmful★★★↗ | harmful↗ | ✓ right |
| R347L | harmful0.97 | harmful★★↗ | Not measured | ✓ right |
| R347P | harmful0.99 | harmful★★★★↗ | harmful↗ | ✓ right |
| R352Q | harmful0.63 | harmful★★★↗ | harmful↗ | ✓ right |
| S364P | harmful0.98 | harmful★★↗ | Not measured | ✓ right |
| L375F | harmful0.66 | harmful★★↗ | Not measured | ✓ right |
| E403D | harmless0.20 | harmful★★↗ | Not measured | ✗ missed it |
| L453S | harmful0.85 | harmful★★★↗ | harmful↗ | ✓ right |
| A455E | harmful0.95 | harmful★★★★↗ | harmful↗ | ✓ right |
| V456A | harmful0.68 | harmful★★★↗ | harmful↗ | ✓ right |
| V456F | harmful0.57 | harmful★★↗ | Not measured | ✓ right |
| G458V | harmful0.96 | harmful★★↗ | Not measured | ✓ right |
| K464E | harmful0.90 | harmful★★↗ | Not measured | ✓ right |
| K464N | harmful0.96 | harmful★★↗ | Not measured | ✓ right |
| T465N | harmful0.76 | harmful★★↗ | Not measured | ✓ right |
| L467P | harmful0.99 | harmful★★★↗ | harmful↗ | ✓ right |
| M469V | unsure0.51 | harmful★★↗ | Not measured | AI unsure |
| V470M | harmless0.05 | harmless★★↗ | Not measured | ✓ right |
| E474K | harmful0.93 | harmful★★★↗ | harmful↗ | ✓ right |
| G480C | harmful0.93 | harmful★★↗ | Not measured | ✓ right |
| G480D | harmful0.95 | harmful★★↗ | Not measured | ✓ right |
| S492F | harmful0.64 | harmful★★★↗ | harmful↗ | ✓ right |
| Q493R | harmful0.73 | harmful★★↗ | Not measured | ✓ right |
| T501A | harmless0.25 | harmful★★↗ | Not measured | ✗ missed it |
| I502T | harmful0.89 | harmful★★★↗ | harmful↗ | ✓ right |
| I507V | harmless0.07 | harmless★★↗ | Not measured | ✓ right |
| F508C | harmful0.87 | Not measured | harmless↗ | ✗ false alarm |
| D513G | harmful0.88 | harmful★★★↗ | harmful↗ | ✓ right |
| V520F | harmful0.88 | harmful★★★↗ | harmful↗ | ✓ right |
| S549N | harmful0.95 | harmful★★★↗ | harmful↗ | ✓ right |
| S549R | harmful0.99 | harmful★★★↗ | harmful↗ | ✓ right |
| G551D | harmful0.99 | harmful★★★★↗ | harmful↗ | ✓ right |
| G551S | harmful0.88 | harmful★★★↗ | harmful↗ | ✓ right |
| Q552P | harmful0.96 | harmful★★↗ | Not measured | ✓ right |
| I556V | harmless0.12 | harmless★★↗ | Not measured | ✓ right |
| L558S | harmful0.97 | harmful★★★↗ | harmful↗ | ✓ right |
| A559P | harmful0.99 | harmful★★↗ | Not measured | ✓ right |
| A559T | harmful0.93 | harmful★★★↗ | harmful↗ | ✓ right |
| R560K | harmful0.79 | harmful★★★↗ | harmful↗ | ✓ right |
| R560S | harmful0.99 | harmful★★★↗ | harmful↗ | ✓ right |
| R560T | harmful0.98 | harmful★★★★↗ | harmful↗ | ✓ right |
| A561E | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| V562I | harmless0.07 | Not measured | harmless↗ | ✓ right |
| Y563C | harmful0.80 | harmful★★↗ | Not measured | ✓ right |
| Y563D | harmful1.00 | harmful★★★↗ | harmful↗ | ✓ right |
| Y563H | harmful0.97 | harmful★★↗ | Not measured | ✓ right |
| Y563N | harmful0.96 | harmful★★★↗ | harmful↗ | ✓ right |
| Y569C | harmful0.76 | harmful★★↗ | Not measured | ✓ right |
| Y569D | harmful1.00 | harmful★★★↗ | harmful↗ | ✓ right |
| Y569H | harmful0.96 | harmful★★↗ | Not measured | ✓ right |
| L571S | harmful0.94 | harmful★★↗ | Not measured | ✓ right |
| D572N | harmful0.93 | harmful★★↗ | Not measured | ✓ right |
| P574H | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| G576A | harmless0.19 | Not measured | harmless↗ | ✓ right |
| S589I | harmless0.16 | harmful★★↗ | Not measured | ✗ missed it |
| S589N | harmless0.09 | harmful★★↗ | Not measured | ✗ missed it |
| I601F | unsure0.49 | harmful★★★↗ | harmful↗ | AI unsure |
| I601T | harmful0.97 | harmful★★↗ | Not measured | ✓ right |
| T604I | harmful0.92 | harmful★★↗ | Not measured | ✓ right |
| H609R | harmful0.78 | harmful★★★↗ | harmful↗ | ✓ right |
| A613T | unsure0.39 | harmful★★★↗ | harmful↗ | AI unsure |
| D614G | unsure0.41 | harmful★★↗ | Not measured | AI unsure |
| I618T | harmful0.92 | harmful★★↗ | Not measured | ✓ right |
| G628A | harmful0.66 | harmful★★↗ | Not measured | ✓ right |
| G628R | harmful0.88 | harmful★★★↗ | harmful↗ | ✓ right |
| R668C | harmless0.10 | Not measured | harmless↗ | ✓ right |
| V754M | harmless0.07 | Not measured | harmless↗ | ✓ right |
| I807M | harmless0.16 | Not measured | harmless↗ | ✓ right |
| D836Y | harmless0.17 | Not measured | harmless↗ | ✓ right |
| Y913C | unsure0.38 | harmful★★↗ | Not measured | AI unsure |
| L927P | harmful0.93 | harmful★★★↗ | harmful↗ | ✓ right |
| S945L | harmful0.83 | harmful★★★↗ | harmful↗ | ✓ right |
| G970D | harmful0.76 | harmful★★★↗ | harmful↗ | ✓ right |
| G970R | harmful0.66 | harmful★★★↗ | harmful↗ | ✓ right |
| D979V | harmful0.99 | harmful★★★↗ | harmful↗ | ✓ right |
| L997F | harmful0.74 | Not measured | harmless↗ | ✗ false alarm |
| I1005R | harmful0.89 | harmful★★↗ | Not measured | ✓ right |
| A1006E | harmful0.80 | harmful★★★↗ | harmful↗ | ✓ right |
| P1021L | unsure0.43 | harmful★★↗ | Not measured | AI unsure |
| P1021T | unsure0.54 | harmful★★↗ | Not measured | AI unsure |
| I1023R | harmful0.90 | harmful★★↗ | Not measured | ✓ right |
| I1027T | harmless0.31 | Not measured | harmless↗ | ✓ right |
| Y1032C | harmless0.27 | harmful★★↗ | Not measured | ✗ missed it |
| T1036I | harmful0.86 | harmful★★↗ | Not measured | ✓ right |
| T1036N | harmful0.77 | harmful★★★↗ | harmful↗ | ✓ right |
| S1045Y | unsure0.56 | harmful★★↗ | Not measured | AI unsure |
| T1053I | unsure0.35 | Not measured | harmless↗ | AI unsure |
| H1054D | harmful0.95 | harmful★★★↗ | harmful↗ | ✓ right |
| G1061R | harmful0.99 | harmful★★★↗ | harmful↗ | ✓ right |
| L1065P | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| L1065R | harmful0.96 | harmful★★↗ | Not measured | ✓ right |
| R1066C | harmful0.92 | harmful★★★↗ | harmful↗ | ✓ right |
| R1066H | harmful0.80 | harmful★★★↗ | harmful↗ | ✓ right |
| R1066L | harmful0.97 | harmful★★↗ | Not measured | ✓ right |
| Q1071P | harmful0.72 | harmful★★↗ | Not measured | ✓ right |
| Y1073C | unsure0.46 | harmful★★↗ | Not measured | AI unsure |
| F1074L | harmful0.97 | harmful★★↗ | Not measured | ✓ right |
| L1077P | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| H1085R | harmful0.93 | harmful★★↗ | Not measured | ✓ right |
| A1087P | harmful0.99 | harmful★★↗ | Not measured | ✓ right |
| W1098C | harmful0.87 | harmful★★★↗ | harmful↗ | ✓ right |
| W1098R | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| Q1100P | harmful0.95 | harmful★★↗ | Not measured | ✓ right |
| M1101K | harmful0.80 | harmful★★★↗ | harmful↗ | ✓ right |
| M1101R | harmful0.77 | harmful★★★↗ | harmful↗ | ✓ right |
| S1118F | harmful0.91 | harmful★★★↗ | harmful↗ | ✓ right |
| M1137R | harmful0.96 | harmful★★↗ | Not measured | ✓ right |
| S1159F | harmful0.93 | harmful★★★↗ | harmful↗ | ✓ right |
| S1159P | harmful0.80 | harmful★★★↗ | harmful↗ | ✓ right |
| R1162L | harmful0.89 | Not measured | harmless↗ | ✗ false alarm |
| I1234V | harmless0.08 | harmful★★★↗ | harmful↗ | ✗ missed it |
| S1235R | harmless0.19 | Not measured | harmless↗ | ✓ right |
| V1240G | unsure0.56 | harmful★★★↗ | harmful↗ | AI unsure |
| G1244E | harmful0.99 | harmful★★★↗ | harmful↗ | ✓ right |
| T1246I | harmful0.98 | harmful★★↗ | Not measured | ✓ right |
| G1247R | harmful0.95 | harmful★★↗ | Not measured | ✓ right |
| G1249R | harmful0.95 | harmful★★★↗ | harmful↗ | ✓ right |
| S1251N | harmful0.93 | harmful★★★↗ | harmful↗ | ✓ right |
| S1255P | harmful0.79 | harmful★★★↗ | harmful↗ | ✓ right |
| I1269N | harmful0.92 | harmful★★★↗ | harmful↗ | ✓ right |
| W1282G | harmful0.91 | harmful★★↗ | Not measured | ✓ right |
| W1282R | harmful0.99 | harmful★★↗ | Not measured | ✓ right |
| R1283M | harmful0.97 | harmful★★★↗ | harmful↗ | ✓ right |
| R1283S | harmful0.99 | harmful★★↗ | Not measured | ✓ right |
| Q1291H | harmful0.97 | harmful★★↗ | Not measured | ✓ right |
| N1303I | harmful0.79 | harmful★★↗ | Not measured | ✓ right |
| N1303K | harmful0.99 | harmful★★★★↗ | harmful↗ | ✓ right |
| L1324P | harmful1.00 | harmful★★★↗ | harmful↗ | ✓ right |
| L1335P | harmful0.82 | harmful★★★↗ | harmful↗ | ✓ right |
| G1349D | harmful0.98 | harmful★★★↗ | harmful↗ | ✓ right |
| I1366N | harmful0.95 | harmful★★★↗ | harmful↗ | ✓ right |
| H1375P | harmful0.62 | harmful★★★↗ | harmful↗ | ✓ right |
204 variants · “harmful” = disease-causing, “harmless” = benign. Use arrow keys to move between rows and Enter to select one.